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x
2
r
2
Z; 2
(Lande 1981). Note that the value of selection differentials
will change with both the mean and variance of phenotypes
before selection.
If selection can be measured for multiple cohorts, then one
can estimate parameters of the underlying tness surface by
nding the parameters of eqn 2 that are most likely to have
produced the observed values of S, given values of z and r
2
.
The degree of t between predicted and observed values of S
can provide a heuristic indication of how well selection can be
described by a constant tness surface. Once the tness sur-
face (W
z
) is estimated, the mean tness (survival) of a cohort
can also be estimated as p
z
W
z
dz, where p
z
is the phenotype
distribution specied by the mean and variance of phenotypic
values before selection.
We used maximum likelihood to t a non-linear model
(eqn 2) to Macpherson & Raventos (2005) data on selection
differentials on PLD. Our likelihood function was specied by
assuming that the residual variation of the selection differentials
was normally distributed with equal variance across observa-
tions. Mean values were specied by eqn 2, and variance was
estimated from the data. We used the optim function in R
(R Development Core Team 2013) and a Nelder-Mead
non-linear optimisation algorithm to nd the parameter
values of eqn 2 that were most likely to have produced
the observed selection differentials. As a measure of explana-
tory power, we used a pseudo r
2
value, dened as
1
P
obs: pred:
2
=
P
obs: mean
2
. Note that although a
value of 1 is possible only when there is absolutely no measure-
ment error in observed values S, this statistic provides a useful
approximation for the explanatory power of non-linear models.
A Gaussian surface did a reasonable job of describing
variation in selection differentials (pseudo r
2
= 0.61). This esti-
mate of the tness surface suggested that shorter PLDs were
favoured, with an optimum suggested to be somewhere in the
vicinity of 2 SD below the overall, among-cohort mean PLD
(Fig. 3b). One can estimate selective mortality for each cohort
by calculating the area of overlap between the distribution of
phenotypes and the tness surface. This estimates the mini-
mum amount of mortality a cohort experiences, since it does
not include non-selective mortality (nor does it include mor-
tality that is selective, but independent of the focal trait).
Estimates of selective mortality associated with PLD ranged
(a)
(b)
Figure 3 (a) Variation in selection on pelagic larval duration (PLD) in a
demersal blenny (Lipophyrs trigloides). Cohorts with shorter average
PLDs experienced weaker selection (PLD values are centred and scaled to
the average, within-cohort SD). Data from Macpherson & Raventos
(2005). (b) Estimated tness surface relating PLD to survival. The degree
of mismatch between the distribution of phenotypes (dashed lines) and
the tness surface (solid line) determines the amount of selective
mortality. For cohort 1 (white histogram), only those individuals in the
lower tail of the distribution have an appreciable probability of survival.
This results in a large shift in mean value (S = 2.37) and high selective
mortality ( 0.96). For cohort 8 (grey histogram) the mean is near the
estimated peak of tness curve, suggesting little directional selection.
Moreover, this distribution overlaps a region of high tness, suggesting
that selective mortality is low ( 0.35).
2014 John Wiley & Sons Ltd/CNRS
748 D. W. Johnson et al. Review and Synthesis
from 0.35 to 0.96. Assuming non-selective mortality is similar
across cohorts, these are large differences in relative survival.
A multivariate example
When estimates of means, variances, covariances and selection
differentials are available for multiple traits and multiple
cohorts, a similar procedure can be used to estimate a multi-
variate tness surface. Although multivariate tness surfaces
can be more difcult to display, they are likely to be more
accurate because selection gradients are likely to be more
accurate than selection differentials (Lande & Arnold 1983).
Also, explicitly accounting for trait covariances and correla-
tional selection will provide a more accurate accounting of
selective mortality.
To illustrate how selection measurements can be used to
reconstruct multivariate tness surfaces over a broad range of
phenotypic values, we used data from a study of selective
mortality on early life-history traits in a reef-associated wrasse
(Thalassoma bifasciatum; Grorud-Colvert & Sponaugle 2011).
Within this dataset, measurements of selection were made for
eight cohorts of sh settling to similar reef habitats in the
Florida Keys, USA. Larvae of this species settle and bury into
sand and rubble habitat for 35 days while they undergo
metamorphosis. The before-selection sample represents sh
that were captured immediately after emergence (i.e. sh
whose ages were 04 days post emergence). The after-selection
sample represents sh of the same cohort that were captured
as surviving juveniles (ages > 9 days post emergence). For this
example we analysed selective mortality on larval growth rate
(estimated from width of otolith increments during the larval
stage), and width of the metamorphic band deposited in the
otolith during metamorphosis (an indicator of settlement con-
dition and energy reserves; Hamilton 2008).
As a rst step in evaluating whether variation in multivari-
ate selection can be explained by phenotypic variation on a
constant, multivariate surface, we examined relationships
between distributions of trait values and strength of selection.
For each cohort, we calculated selection gradients on both
larval growth and condition using the procedures outlined by
Johnson et al. (2012). Briey, for each cohort we used the
differences in means before and after selection to calculate
selection differentials, and then multiplied this vector by the
inverse of the observed variancecovariance matrix to convert
selection differentials to selection gradients. Selection gradi-
ents measure direct selection on each trait and provide a mea-
sure of the slope of the tness surface along the direction of
the focal phenotype (Phillips & Arnold 1989). These slope
estimates are averaged across the observed distribution of
phenotypes, and if the tness surface is non-linear, selection
gradients will depend on trait variances. However, examining
relationships between selection gradients and mean trait val-
ues can still provide a useful, rst look at the tness surface.
The results of such exploratory procedures can then be used
to inform subsequent analyses.
For condition, the selection gradients varied strongly with
mean phenotypic value (Fig. 4). These data suggest a tness
surface that is constant and that becomes less steep as condition
increases, but levels out (i.e. the slope approaches zero) at
~0.5 SD above the mean. Selection gradients varied much less
for larval growth (Fig. 4b) and many of the values were near
zero, suggesting a low slope in the vicinity of the observed mean
values. Variances in the after-selection samples tended to be
smaller than those in the before-selection samples (mean values
of the variance ratios were 0.74 for condition, 0.82 for larval
growth), suggesting a concave-down tness surface. Taken
together, these data suggest that a Gaussian function may be a
reasonable model for the tness surface (Lande 1981).
Assuming that tness can be described as a multivariate,
Gaussian function of phenotypic values then
W
z
exp a
1
2
z h
T
1z h
; 3
where the vector h indicates the location of the phenotypic opti-
mum, the matrix x describes the dispersion of tness values
about the optimum and a describes non-selective mortality.
Assuming that the distribution of phenotypes before selection
can be described as multivariate normal with means z and
covariance matrix P, then the distribution of phenotypes after
selection is also a multivariate Gaussian distribution with a vec-
tor of means, z
x P
1
xz P 4a
(a)
(c)
(b)
Figure 4 (a, b) Variation in selection on larval condition and growth in
the bluehead wrasse (Thalassoma bifasciatum). Selection gradients
estimate direct selection on each trait and trait values are centred and
scaled to the average, within-cohort SD. The strength of directional
selection on condition decreased with the mean value. Directional
selection on larval growth was much weaker. Numbers above each point
indicate cohort identity and are labelled as in the original study (cohorts.
Data from Grorud-Colvert & Sponaugle (2011). (c) Estimated tness
surface relating larval growth and condition to survival. Contours
represent lines of equal tness (survival probability) along a multivariate
Gaussian surface. Points indicate the bivariate means for each cohort.
2014 John Wiley & Sons Ltd/CNRS
Review and Synthesis Selective mortality and recruitment 749
P
x P
1
xP: 4b
Note that in the multivariate case, the values of the selec-
tion differentials z
x
2
r
2
p e
zh
2
2x
2
r
2
e
abNS
; 6
where h is the optimal phenotypic value, x indicates the width
of the curve describing tness, and z and r
2
are the mean and
variance of the cohort before selection. Other symbols are as
in eqn 5. Note that in this model, the function describing the
rate of selective mortality was not affected by density. This is
because in this system we expect the main mechanism of den-
sity dependence (egg mortality because of nest site disturbance
at high spawner density) to be largely independent of the
main source of selective mortality (size-selective predation
during the juvenile phase; Ward et al. 1989), which is trace-
able in our model due to the correlation between size of off-
spring and the size of male parents in salmonid populations
(Heath et al. 1999; Smoker et al. 2000; Carlson & Seamons
2008). However, if selection is expected to depend on density
(or any other measurable environmental factor), it is straight-
forward to incorporate these effects into f
z
(e.g. by modelling
selective mortality as a function of both phenotype and den-
sity; Appendix S2).
We t both the density-dependent model (eqn 5) and the
combined phenotype- and density-dependent model (eqn 6) to
the observed recruitment values. Our likelihood functions
were specied by assuming that the observed estimates of
recruitment were Poisson distributed with mean values
specied by either eqn 5 or eqn 6. In each case we used the
optim function in R (R Development Core Team 2013) and a
Nelder-Mead algorithm to nd the parameter values that were
most likely to have produced the observed pattern of recruit-
ment. Fitting both models to the data suggested that the
phenotype- and density-dependent model ts better
(AICc = 4.5), and that adding phenotypic variation as a pre-
dictor more than doubled the explanatory power of the
stockrecruit relationship (pseudo r
2
= 0.39). These results
suggest that even in a strongly density-regulated system, phe-
notypic variation and selective mortality can be an important
source of variation in survival and recruitment (Fig. 7). These
results also suggest that within this population, large body
size of males provides more than just a competitive mating
advantage. That cohorts with larger mean body sizes
produced more surviving offspring supports a previously
hypothesised link between male body size and overall quality
and/or quantity of offspring.
DISCUSSION
Understanding how phenotypic variation interacts with selec-
tive mortality and density dependence can greatly improve
our understanding of recruitment. It is clear that selective
mortality can be substantial, with episodes of selection fre-
quently removing more than half of the individuals from a
cohort. Moreover, variation in selective mortality among
cohorts can also be large, suggesting considerable effects on
recruitment variability. Here, we have described a framework
to evaluate how phenotypic variation can result in systematic
differences in selective mortality. This framework can be
extremely valuable for making sense of the apparent variabil-
ity in selection and for understanding variation in population
replenishment.
Our examples illustrate that the relationships between phe-
notypes and early life survival may be relatively constant. In
contrast, the distributions of phenotypes that affect survival
appear to differ substantially among cohorts. It is the latter
phenomenon that may be responsible for much of the varia-
tion in selective mortality. A major implication is that if t-
ness surfaces can be estimated, and one has information on
the distribution of phenotypes that affect survival, then
recruitment may be reasonably predictable. In fact, informa-
tion on phenotypic variability and selective mortality can be
used in a manner similar to stockrecruitment models: mea-
sured attributes of the system (e.g. phenotype distributions
and tness surfaces) can be used to predict average values of
recruitment.
Although tness surfaces can change with environmental
conditions, situations in which tness surfaces are essentially
constant may not be particularly rare. However, if tness sur-
faces are commonly non-linear, they may be difcult to
describe. The challenge for biologists will be to conduct stud-
ies with enough replicate measures of selection to reconstruct
tness surfaces and rigorously evaluate whether tness sur-
faces may be treated as constant. Although we acknowledge
that for shes, such studies are rare, evidence of constancy in
tness surfaces has regularly been observed for other taxa.
For example, systematic and strong relationships between
phenotype distributions and selection measurements have been
Figure 7 Combined effects of mean body size and number of adult males
on recruitment of steelhead trout. Recruitment is dened as the number
of offspring (both sexes) that returned to spawn as adults. Response
surface illustrates the maximum likelihood t of a combined phenotype-
and density-dependent model (eqn 6 in the main text). To display the
surface, within-cohort variance was held at the overall average. Actual
predictions of recruitment are based on variation in both means and
variances. Original data from Seamons et al. (2007).
2014 John Wiley & Sons Ltd/CNRS
752 D. W. Johnson et al. Review and Synthesis
observed in well-replicated studies of selection in populations
of insects (e.g. Weis et al. 1992), birds (e.g. Reed et al. 2006;
Brommer & Rattiste 2008; Charmantier et al. 2008), and
mammals (e.g. Wilson et al. 2006). These observations suggest
that the general methods described in this study may be
widely applicable, even if constant tness surfaces are not the
norm. Moreover, when it is clear that tness surfaces do vary
with other features of the local environment (e.g. density or
any other measurable characteristic), such effects may be
incorporated into the function describing the rate of selective
mortality (e.g. f
z
can become f
z,N
in the case of density-depen-
dent selection; Appendix S2).
When mortality is density dependent, information on phe-
notype distributions and selective mortality can add another
dimension to traditional stockrecruitment models. Simple,
density-dependent models usually do a reasonable job of
describing non-linear relationships between density and
recruitment. However, such models typically do a poor job of
explaining variability in real data (Iles 1994; Myers 2001). In
other words, density-dependent models capture the central
tendency of recruitment, but they cannot explain why certain
cohorts deviate from this central tendency. Several studies
have implied that accounting for some forms of phenotypic
variation (particularly changes in the age/size composition of
the spawning population) in stockrecruitment models can
improve their performance (Marteinsdottir & Thorarinsson
1998; Scott et al. 1999; Lucero 2009; Brunel 2010). However,
both density dependence and the relationship between pheno-
type(s) and survival are often strongly non-linear. Because of
this, simple approaches to analysing the effects of phenotype
and density on recruitment (e.g. multiple regression) are unli-
kely to be adequate. For example, on curvilinear tness sur-
faces, differences in the variances of cohorts can lead to large
differences in recruitment (eqn 6). For shes, within-cohort
variance is highly variable among cohorts (from our review,
median CV = 23%, range = 2.664%), and likely to be a per-
sistent source of recruitment variation. By starting with indi-
vidual survival probabilities, and accounting for the
distributions of individuals within cohorts, we can generate
models of density-dependent recruitment that properly
account for the non-linear effects of phenotype on survival.
CONCLUSIONS
Our review and synthesis of selection measurements suggests
that for recruiting cohorts of shes, most mortality is selective
mortality. The amount of selective mortality is also highly
variable among cohorts, suggesting that if we have a better
understanding of why selective mortality varies, then we can
improve our understanding of recruitment. Through several
empirical examples where selection has been well studied, our
analyses show that tness surfaces may be relatively constant,
but strongly non-linear. These results suggest that much of
the variation in mortality during the recruitment process may
be predictable and a direct consequence of variation in the
distribution of phenotypes that are important for survival.
The true utility of a framework that describes the combined
effects of phenotypic variation, selective mortality and density
dependence (where applicable) on recruitment is that it will
allow one to evaluate both the short- and long-term conse-
quences of variation in phenotypes. For shes, among-cohort
variation in the distribution of early life traits can be inu-
enced by several factors including temperature (Macpherson
& Raventos 2005; Sponaugle et al. 2006), parental effects
(Heath et al. 1999; McCormick 2006; Johnson et al. 2011),
location of larval development (Hamilton et al. 2008; Shima
& Swearer 2009) and/or source population (e.g. Post & Prank-
evicius 1987). In the short term, knowing the shape of the t-
ness surface will yield insight into how variation in these
environmental factors ultimately translates into variation in
recruitment. In the long term, an accurate description of the
tness surface will be useful in that it will allow investigators
to predict the effects of long-term changes in characteristics of
larvae and juveniles. For example, it is expected that early life
traits will change in response to factors such as shery selec-
tion (Munch et al. 2005; Walsh et al. 2006; Johnson et al.
2011) and climate change (e.g. Munday et al. 2009; Franke &
Clemmesen 2011; Baumann et al. 2012). By understanding
how such changes in phenotypes will ultimately affect recruit-
ment, we will be able to anticipate how changes in the abiotic
and biotic environment will affect both the quality of individ-
uals in the population, and the populations capacity for resis-
tance and/or resilience to environmental change.
ACKNOWLEDGEMENTS
We thank Robert Warner, Todd Seamons, Liz Pasztor and two
anonymous referees for their helpful comments on an earlier
draft of the manuscript. This work was conducted while D.W.J.
was supported by a postdoctoral fellowship from Scripps Insti-
tution of Oceanography. During the preparation of this manu-
script, both S.S. and B.X.S. were supported in part by grants
from the National Oceanic and Atmospheric Administration
(NA11NOS4780045 to S.S., NA10OAR4320156 to B.X.S.).
AUTHORSHIP
D.J., K.G.C., S.S. and B.X.S. conceived the study. D.J. wrote
the rst draft of the manuscript, and all authors contributed
substantially to the revisions.
REFERENCES
Anderson, J.T. (1988). A review of size dependent survival during pre-
recruit stages of shes in relation to recruitment. J. Northwest Atl. Fish.
Sci., 8, 5566.
Bailey, K.M. & Houde, E.D. (1989). Predation on eggs and larvae of marine
shes and the recruitment problem. In Advances in Marine Biology. (eds
Blaxter, J.H.S., Southward, A.J.). Academic, Press, pp. 183.
Baumann, H., Talmage, S.C. & Gobler, C.J. (2012). Reduced early life
growth and survival in a sh in direct response to increased carbon
dioxide. Nature Clim. Change, 2, 3841.
Benton, T.G., Plaistow, S.J. & Coulson, T.N. (2006). Complex population
dynamics and complex causation: devils, details and demography. Proc.
R. Soc. B, 273, 11731181.
Beverton, R.J.H. & Holt, S.J. (1957). On the dynamics of exploited sh
populations. In: Fishery Investigations Series 2: Sea Fisheries, 19,
533pp.
Bjrnstad, O.N. & Hansen, T.F. (1994). Individual variation and
population dynamics. Oikos, 69, 167171.
2014 John Wiley & Sons Ltd/CNRS
Review and Synthesis Selective mortality and recruitment 753
Brommer, J.E. & Rattiste, K. (2008). Hidden reproductive conict
between mates in a wild bird population. Evolution, 62, 23262333.
Brunel, T. (2010). Age-structure-dependent recruitment: a meta-analysis
applied to Northeast Atlantic sh stocks. ICES J. Mar. Sci., 67, 1921
1930.
Cappuccino, N. & Price, P.W. (1995). Population Dynamics: New
Approaches and Synthesis. Academic Press, San Diego, CA, USA.
Carlson, S.M. & Seamons, T.R. (2008). A review of quantitative genetic
components of tness in salmonids: implications for adaptation to
future change. Evol. Appl., 1, 222238.
Charmantier, A., McCleery, R.H., Cole, L.R., Perrins, C., Kruuk, L.E.B.
& Sheldon, B.C. (2008). Adaptive phenotypic plasticity in response to
climate change in a wild bird population. Science, 320, 800803.
Einum, S. & Fleming, I.A. (2000). Highly fecund mothers sacrice
offspring survival to maximize tness. Nature, 405, 565567.
Einum, S., Robertsen, G. & Fleming, I.A. (2008). Adaptive landscapes
and density-dependent selection in declining salmonid populations:
going beyond numerical responses to human disturbance. Evol. Appl.,
1, 239251.
Ellner, S.P., Geber, M.A. & Hairston, N.G. (2011). Does rapid evolution
matter? Measuring the rate of contemporary evolution and its impacts
on ecological dynamics. Ecol. Lett., 14, 603614.
Endler, J.A. (1980). Natural selection on color patterns in Poecilia
reticulata. Evolution, 34, 7691.
Endler, J.A. (1986). Natural Selection in the Wild. Princeton University
Press, Princeton, NJ, USA.
Ezard, T.H.G., C^ ote, S.D. & Pelletier, F. (2009). Eco-evolutionary
dynamics: disentangling phenotypic, environmental and population
uctuations. Phil. Trans. R. Soc. B, 364, 14911498.
Falconer, D.S. & Mackay, T.F.C. (1996). Introduction to Quantitative
Genetics. Longman, England.
Franke, A. & Clemmesen, C. (2011). Effect of ocean acidication on early
life stages of Atlantic herring (Clupea harengus L.). Biogeosciences
Discussions, 8, 70977126.
Fukushima, M., Quinn, T.J. & Smoker, W.W. (1998). Estimation of eggs
lost from superimposed pink salmon (Oncorhynchus gorbuscha) redds.
Can. J. Fish. Aquat. Sci., 55, 618625.
Gaillard, J.-M., Festa-Bianchet, M., Yoccoz, N.G., Loison, A. & Toigo,
C. (2000). Temporal variation in tness components and population
dynamics of large herbivores. Annu. Rev. Ecol. Syst., 31, 367393.
Good, S.P., Dodson, J.J., Meekan, M.G. & Ryan, D.A. (2001). Annual
variation in size-selective mortality of Atlantic salmon (Salmo salar)
fry. Can. J. Fish. Aquat. Sci., 58, 11871195.
Grorud-Colvert, K. & Sponaugle, S. (2011). Variability in water
temperature affects trait-mediated survival of a newly settled coral reef
sh. Oecologia, 165, 675686.
Hairston, N.G., Ellner, S.P., Geber, M.A., Yoshida, T. & Fox, J.A.
(2005). Rapid evolution and the convergence of ecological and
evolutionary time. Ecol. Lett., 8, 11141127.
Hamilton, S.L. (2008). Larval history inuences post-metamorphic
condition in a coral-reef sh. Oecologia, 158, 449461.
Hamilton, S.L., Regetz, J. & Warner, R.R. (2008). Postsettlement survival
linked to larval life in a marine sh. Proc. Natl Acad. Sci., 105, 1561
1566.
Heath, D.D., Fox, C.W. & Heath, J.W. (1999). Maternal effects on
offspring size: variation through early development of chinook salmon.
Evolution, 53, 16051611.
Hixon, M.A. & Jones, G.P. (2005). Competition, predation, and density-
dependent mortality in demersal marine shes. Ecology, 86, 28472859.
Hixon, M.A. & Webster, M.S. (2002). Density dependence in reef sh
populations. In: Coral Reef Fishes: Dynamics and Diversity in a
Complex Ecosystem (ed Sale, P.F.). Academic Press, San Diego, CA,
USA, pp. 303325.
Houde, E. (1987). Fish early life dynamics and recruitment variability.
Am. Fish. Soc. Symp., 2, 1729.
Houde, E.D. (2008). Emerging from Hjorts Shadow. Journal of
Northwest Atlantic Fishery Science, 41, 5370.
Iles, T.C. (1994). A review of stock-recruitment relationships with
reference to atsh populations. Neth. J. Sea Res., 32, 399420.
Janzen, F.J. & Stern, H.S. (1998). Logistic regression for empirical studies
of multivariate selection. Evolution, 52, 15641571.
Johnson, D.W. (2008). Combined effects of condition and density on
post-settlement survival and growth of a marine sh. Oecologia, 155,
4352.
Johnson, D.W., Christie, M.R. & Moye, J. (2010). Quantifying
evolutionary potential of marine sh larvae: heritability, selection, and
evolutionary constraints. Evolution, 64, 26142628.
Johnson, D.W., Christie, M.R., Moye, J. & Hixon, M.A. (2011). Genetic
correlations between adults and larvae in a marine sh: potential effects
of shery selection on population replenishment. Evol. Appl., 4, 621
633.
Johnson, D.W., GrorudColvert, K., Rankin, T.L. & Sponaugle, S. (2012).
Measuring selective mortality from otoliths and similar structures: a
practical guide for describing multivariate selection from cross-sectional
data. Mar. Ecol. Prog. Ser., 471, 151163.
Kokko, H. & L opez-Sepulcre, A. (2007). The ecogenetic link between
demography and evolution: can we bridge the gap between theory and
data? Ecol. Lett., 10, 773782.
Lande, R. (1976). Natural selection and random genetic drift in
phenotypic evolution. Evolution, 30, 314334.
Lande, R. (1981). Models of speciation by sexual selection on polygenic
traits. PNAS, 78, 37213725.
Lande, R. & Arnold, S.J. (1983). The measurement of selection on
correlated characters. Evolution, 37, 12101226.
Lucero, Y. (2009). A multivariate stockrecruitment function for cohorts
with sympatric subclasses: application to maternal effects in rocksh
(genus Sebastes). Can. J. Fish. Aquat. Sci., 66, 557564.
Macpherson, E. & Raventos, N. (2005). Settlement patterns and post-
settlement survival in two Mediterranean littoral shes: inuences of
early-life traits and environmental variables. Mar. Biol., 148, 167177.
Marchinko, K.B. (2009). Predations role in repeated phenotypic and
genetic divergence of armor in threespine stickleback. Evolution, 63,
127138.
Marteinsdottir, G. & Thorarinsson, K. (1998). Improving the stock-
recruitment relationship in Icelandic cod (Gadus morhua) by including
age diversity of spawners. Can. J. Fish. Aquat. Sci., 55, 13721377.
McCormick, M.I. (2006). Mothers matter: crowding leads to stressed
mothers and smaller offspring in marine sh. Ecology, 87, 11041109.
McNeil, W.J. (1964). Redd superimposition and egg capacity of pink
salmon spawning beds. Journal of the Fisheries Board of Canada, 21,
13851396.
Meekan, M. & Fortier, L. (1996). Selection for fast growth during the
larval life of Atlantic cod Gadus morhua on the Scotian Shelf. Mar.
Ecol. Prog. Ser., 137, 2537.
Metcalf, C.J.E. & Pavard, S. (2007). Why evolutionary biologists should
be demographers. Trends Ecol. Evol., 22, 205212.
Miller, T.J., Crowder, L.B., Rice, J.A. & Marschall, E.A. (1998). Larval
size and recruitment mechanisms in shes: Toward a conceptual
framework. Canadian Journal of Fisheries and Aquatic Sciences, 45,
16571670.
Mitchell-Olds, T. & Shaw, R.G. (1987). Regression analysis of natural
selection: statistical inference and biological interpretation. Evolution,
41, 11491161.
Morrissey, M.B. & Hadeld, J.D. (2012). Directional selection in
temporally replicated studies is remarkably consistent. Evolution, 66,
435442.
Munch, S.B., Walsh, M.R. & Conover, D.O. (2005). Harvest selection,
genetic correlations, and evolutionary changes in recruitment: one less
thing to worry about? Can. J. Fish. Aquat. Sci., 62, 802810.
Munday, P.L., Donelson, J.M., Dixson, D.L. & Endo, G.G.K. (2009).
Effects of ocean acidication on the early life history of a tropical
marine sh. Proc. R. Soc. B, 276, 32753283.
Murdoch, W.W. (1994). Population regulation in theory and practice.
Ecology, 75, 271287.
2014 John Wiley & Sons Ltd/CNRS
754 D. W. Johnson et al. Review and Synthesis
Myers, R.A. (2001). Stock and recruitment: generalizations about
maximum reproductive rate, density dependence, and variability using
meta-analytic approaches. ICES J. Mar. Sci., 58, 937951.
Myers, R.A. & Cadigan, N.G. (1993). Density-dependent juvenile
mortality in marine demersal sh. Can. J. Fish. Aquat. Sci., 50, 1576
1590.
Osenberg, C.W., St. Mary, C.M., Schmitt, R.J., Holbrook, S.J., Chesson,
P. & Byrne, B.. (2002). Rethinking ecological inference: density
dependence in reef shes. Ecol. Lett., 5, 715721.
Pelletier, F., Garant, D. & Hendry, A.P. (2009). Eco-evolutionary
dynamics. Phil. Trans. R. Soc. B, 364, 14831489.
Perez, K.O. & Munch, S.B. (2010). Extreme selection on size in the early
lives of sh. Evolution, 64, 24502457.
Phillips, P.C. & Arnold, S.J. (1989). Visualizing multivariate selection.
Evolution, 43, 12091222.
Post, J.R. & Prankevicius, A.B. (1987). Size-selective mortality in young-
of-the-year yellow perch (Perca avescens): evidence from otolith
microstructure. Can. J. Fish. Aquat. Sci., 44, 18401847.
Press, S.J. (2012). Applied Multivariate Analysis: Using Bayesian and
Frequentist Methods of Inference, 2nd edn. Courier Dover Publications,
Mineola, NY, USA.
R Development Core Team. (2013). R: A language and environment for
statistical computing. R Foundation for Statistical Computing, Vienna,
Austria.
Rankin, T.L. & Sponaugle, S. (2011). Temperature inuences selective
mortality during the early life stages of a coral reef sh. PLoS ONE, 6,
e16814.
Reed, T.E., Wanless, S., Harris, M.P., Frederiksen, M., Kruuk, L.E.B. &
Cunningham, E.J.A. (2006). Responding to environmental change:
plastic responses vary little in a synchronous breeder. Proc. R. Soc. B,
273, 27132719.
Reznick, D.N. & Bryga, H. (1987). Life-history evolution in guppies
(Poecilia reticulata): 1. phenotypic and genetic changes in an
introduction experiment. Evolution, 41, 13701385.
Ricker, W. (1954). Stock and recruitment. J. Fish. Res. Board Can., 11,
559609.
Rose, K.A., Cowan, J.H., Winemiller, K.O., Myers, R.A. & Hilborn, R.
(2001). Compensatory density dependence in sh populations:
importance, controversy, understanding and prognosis. Fish Fish., 2,
293327.
Ruel, J.J. & Ayres, M.P. (1999). Jensens inequality predicts effects of
environmental variation. Trends Ecol. Evol., 14, 361366.
Saccheri, I. & Hanski, I. (2006). Natural selection and population
dynamics. Trends Ecol. Evol., 21, 341347.
Schoener, T.W. (2011). The newest synthesis: understanding the interplay
of evolutionary and ecological dynamics. Science, 331, 426429.
Scott, B., Marteinsdottir, G. & Wright, P. (1999). Potential effects of
maternal factors on spawning stockrecruitment relationships under
varying shing pressure. Can. J. Fish. Aquat. Sci., 56, 18821890.
Seamons, T.R., Bentzen, P. & Quinn, T.P. (2007). DNA parentage
analysis reveals inter-annual variation in selection: results from
19 consecutive brood years in steelhead trout. Evol. Ecol. Res., 9, 409
431.
Shima, J.S. & Swearer, S.E. (2009). Larval quality is shaped by matrix
effects: implications for connectivity in a marine metapopulation.
Ecology, 90, 12551267.
Shima, J.S., Osenberg, C.W., St Mary, C.M. & Rogers, L. (2006).
Implication of changing coral communities: do larval traits or habitat
features drive variation in density-dependent mortality and recruitment
of juvenile reef sh. Proceedings of the 10th International Coral Reef
Symposium, Okinawa, Japan, pp. 226231.
Siepielski, A.M., DiBattista, J.D. & Carlson, S.M. (2009). Its about time:
the temporal dynamics of phenotypic selection in the wild. Ecol. Lett.,
12, 12611276.
Smallegange, I.M. & Coulson, T. (2013). Towards a general, population-
level understanding of eco-evolutionary change. Trends Ecol. Evol., 28,
143148.
Smith, C.C. & Fretwell, S.D. (1974). The optimal balance between size
and number of offspring. Am. Nat., 108, 499506.
Smoker, W.W., Gharrett, A.J., Stekoll, M.S. & Taylor, S.G. (2000).
Genetic variation of fecundity and egg size in anadromous pink salmon
Oncorhynchus gorbuscha Walbaum. Alaska Fishery Research Bulletin, 7,
4450.
Sogard, S.M. (1997). Size-selective mortality in the juvenile stage of
teleost shes: a review. Bull. Mar. Sci., 60, 11291157.
Sponaugle, S. (2010). Otolith microstructure reveals ecological and
oceanographic processes important to ecosystem-based management.
Environ. Biol. Fishes, 89, 221238.
Sponaugle, S., Grorud-Colvert, K. & Pinkard, D. (2006). Temperature-
mediated variation in early life history traits and recruitment success of
the coral reef sh Thalassoma bifasciatum in the Florida Keys. Mar.
Ecol. Prog. Ser., 308, 115.
Steele, D.B., Siepielski, A.M. & McPeek, M.A. (2011). Sexual selection
and temporal phenotypic variation in a damsely population. J. Evol.
Biol., 24, 15171532.
Thompson, J.N. (1998). Rapid evolution as an ecological process. Trends
Ecol. Evol., 13, 329332.
Van Tienderen, P.H. (2000). Elasticities and the link between
demographic and evolutionary dynamics. Ecology, 81, 666679.
Van Valen, L. (1965). Selection in natural populations. iii. measurement
and estimation. Evolution, 19, 514528.
Vance, R.R. (1973). On reproductive strategies in marine benthic
invertebrates. Am. Nat., 107, 339352.
Walsh, M.R., Munch, S.B., Chiba, S. & Conover, D.O. (2006).
Maladaptive changes in multiple traits caused by shing: impediments
to population recovery. Ecol. Lett., 9, 142148.
Ward, D.L., Slaney, P.A., Facchin, A.R. & Land, R.W. (1989). Size-
biased survival in steelhead trout (Oncorhynchus mykiss): Back-
calculated lengths from adults scales compared to migrating smolts at
the Keogh River, British Columbia. Canadian Journal of Fisheries and
Aquatic Sciences, 46, 18531858.
Weis, A.E., Abrahamson, W.G. & Andersen, M.C. (1992). Variable
selection on Eurostas gall size, i: the extent and nature of variation in
phenotypic selection. Evolution, 46, 16741697.
Wilson, A.J., Pemberton, J.M., Pilkington, J.G., Coltman, D.W., Mifsud,
D.V., Clutton-Brock, T.H. et al. (2006). Environmental coupling of
selection and heritability limits evolution. PLoS Biol., 4, e216.
SUPPORTING INFORMATION
Additional Supporting Information may be downloaded via
the online version of this article at Wiley Online Library
(www.ecologyletters.com).
Editor, Mikko Heino
Manuscript received 26 December 2013
First decision made 31 January 2014
Second decision made 18 February 2014
Manuscript accepted 24 February 2014
2014 John Wiley & Sons Ltd/CNRS
Review and Synthesis Selective mortality and recruitment 755