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Synaptogenesis and the role of dendritic protrusions in this process are well studied in glutamatergic synapses. Much less is
known about the formation of GABAergic synapses, which are located predominantly on the dendritic shaft. We used genetically
labeled interneurons in mature hippocampal slice cultures and two-photon laser-scanning microscopy to examine contact
formation between GABAergic axons and the dendrites of CA1 pyramidal cells. Dendritic protrusions distinguished and selected
between glutamatergic and GABAergic boutons. In contrast with contacts with glutamatergic boutons, which can be long lasting,
the contacts of dendritic protrusions with GABAergic boutons were always short lived. Similarly, the contacts made by GABAergic
axonal protrusions were always transient. New putative GABAergic synapses were formed exclusively by new boutons appearing at
pre-existing axon-dendrite crossings without the involvement of any dendritic or axonal protrusions. These findings imply that
fundamentally different mechanisms underlie the generation of GABAergic and glutamatergic synapses.
Chemical synapses are the key connective elements in neuronal net- serve to guide presynaptic axons to the dendritic shaft, thereby
works. They are not only crucial for information processing, but their mediating the formation of shaft synapses5,6. However, it is unresolved
plasticity also endows the brain with its outstanding capacity for to date how often this occurs and whether alternative scenarios,
adaptation to the environment. Understanding synapses and how possibly involving a more active role of the GABAergic axon, are also
they are formed is therefore a fundamentally important task in important in the formation of GABAergic contacts.
neuroscience. So far, the majority of studies have focused on the We used high-resolution two-photon imaging of genetically labeled
formation of glutamatergic synapses, whereas the formation of the GABAergic neurons and their postsynaptic counterparts to examine
other major type of synapse in the brain, which uses the inhibitory how new GABAergic shaft synapses are formed in the CA1 area of
transmitter GABA, remains less examined, in spite of the fact that organotypic hippocampal cultures. We found that new GABAergic
GABAergic synapses form 10–20% of all synapses in the brain and are boutons, probably indicating new GABAergic synapses, were formed
indispensable for the proper and stable functioning of the brain1. exclusively at pre-existing axon-dendrite crossings, without the in-
Glutamatergic synapses on excitatory neurons in the hippocampus volvement of either dendritic or axonal protrusions. This indicates that
occur almost exclusively on dendritic spines2,3. It is thought that these there are fundamentally different mechanisms for the formation of
spines and their precursors, dendritic filopodia, are actively involved in glutamatergic and GABAergic synapses.
the formation of new glutamatergic synapses. Dendrites grow small
protrusions that make contact with presynaptic axons and boutons4–8. RESULTS
Only a subset of these initial contacts is selected through filopodial To visualize GABAergic axons, we used hippocampal slice cultures
signaling and forms mature, functional synapses9–11. During further of GAD65-GFP mice. In these mice, 30–50% of GABAergic inter-
maturation of a new synaptic contact, the dendritic protrusion neurons in the hippocampus express GFP at embryonic ages and
shrinks as its head expands, turning into a mature spine4,12,13. In this well into adulthood17. Dendrites of 2–5 CA1 pyramidal neurons
scenario, dendritic filopodia precede fully mature spines and it has were filled with Alexa Fluor 594 through a patch pipette before
been shown that long, thin dendritic protrusions that are reminiscent imaging. This resulted in a sparse overlap between GFP-labeled
of filopodia can have (sometimes even multiple) synaptic contacts5,6,14. GABAergic axons and Alexa 594–labeled dendrites, allowing the
Although the above is probably not the only way to form new synapses contacts between GABAergic axons and boutons with labeled dendritic
on spines15, the studies cited above provide ample evidence of a role for structures to be resolved in detail with two-photon laser-scanning
outgrowing protrusions in the formation of glutamatergic synapses. microscopy (Fig. 1a,b). We took high-resolution image stacks every
In contrast to glutamatergic synapses, GABAergic synapses are 30 min for a total period of 3–6 h and examined the formation
usually not located on spines but are found directly on the dendritic of contacts between GABAergic axons and apical dendrites of CA1
shaft1,3,16. It has been suggested that dendritic protrusions can also pyramidal neurons. In total, we analyzed the time-lapse series
Max Planck Institute of Neurobiology, Cellular and Systems Neurobiology, Am Klopferspitz 18, 82152 Martinsreid, Germany. Correspondence should be addressed to C.J.W.
(wierenga@neuro.mpg.de).
Received 19 March; accepted 30 June; published online 24 August 2008; doi:10.1038/nn.2180
1h 1h
transient contact with a nearby GABAergic bouton. (c) An axonal protrusion
(AP) grew out from a GABAergic bouton that was contacting the labeled
1.5 h 1.5 h
dendrite. The protrusion made contact with the dendrite twice (see
Supplementary Fig. 1), but the contact was not present at the end of the
imaging period. (d) An AP grew out and formed a transient contact with
the labeled dendrite. Both boutons did not form contacts with the labeled
1.5 h 1.5 h
dendrite. Scale bars represent 1 mm.
Red dendrites of CA1 pyramidal cells dendritic or axonal protrusion makes contact
Green GABAergic axons/boutons protrusion without contact protrusion (and its contact) was not present the next day and the axon
c d 0h 0h and dendrite appeared to be unchanged. This shows that, even in our
longest-lasting contact between axonal protrusion and dendritic shaft,
the contact did not seem to be transformed into a stable synapse. These
0h 0h
observations suggest that axonal protrusions grow out and make
transient contacts with the dendritic shaft, but they are not transformed
3h 3h
into long-lasting, stable contacts.
AP
2.5 h 2.5 h
4h 4h
SB SB quantified the duration of each episode of contact or bouton appear-
ance, the number of repeated contacts or bouton appearances during
the imaging period, and the total percentage of the imaging period in
5h 5h 4h 4h which the contact or bouton was present. The durations for all types of
SB transient events were fairly similar and transient events were much
SB shorter compared to the time a new stable bouton was present (Fig. 4c).
Notably, repeated appearance and disappearance of a transient bouton
Red dendrites of CA1 pyramidal cells stable or transient bouton with contact
at an axon-dendrite crossing was fairly common, whereas contacts
Green GABAergic axons/boutons bouton without contact made by protrusions, either dendritic or axonal, were usually made
c d 0h only once during the imaging period (Fig. 4d). When a transient
bouton appeared at an axon-dendrite crossing, it was present, on
TB
average, for almost 40% of the total imaging period, whereas a transient
0h 0h 0h
contact made by a dendritic protrusion was present for o20% of the
1h time (Fig. 4e). These data support the notion that new GABAergic
synapses are formed by the occurrence of a new GABAergic bouton at
an existing axon-dendrite crossing, whereas contacts made by protru-
1h
sions, either axonal or dendritic, have a very low probability of being
0.5 h 0.5 h
2h transformed into stable synapses.
TB
Long-lasting contacts
TB We next examined whether GABAergic boutons that were formed
2h 2h 2h
3.5 h
during the imaging period persisted into the next day. After a night in
the incubator, the Alexa 594 dye was often cleared by the CA1
pyramidal neurons and had gathered mostly in the soma, leaving
only weakly staining in the dendrites. In five experiments, the dendrites
4h 4h 3.5 h
4h
were bright enough to image the same region with sufficient detail the
next day (examples are shown in Supplementary Fig. 3 online). The
TB GABAergic axons and boutons were as bright as the day before and had
largely unchanged morphology.
4h
Of the 86 contacts between GABAergic boutons and labeled dendrites
that were present before and during the entire imaging period on the
entire imaging period were located on spines (90 out of 423 pre-existing first day, 81 were also observed the next day (94%), corroborating their
contacts). We asked whether the appearance of a new bouton prefer- classification as pre-existing stable contacts. Two stable boutons had
entially occurred at axons crossing the dendritic shaft or whether they formed during the experiment at an axon-dendrite crossing that had
also occurred at spines. Two of the 12 new stable boutons and 5 of the 30 stayed present for the rest of the imaging period on the first day. Both
transient boutons appeared at dendritic spines. The fraction of new boutons were still present and in contact with the red dendrite the
boutons appearing on spines versus shafts was not significantly different following day, indicating that the newly formed boutons were indeed
from the fraction of pre-existing GABAergic contacts made on spines long lasting. Of the 15 boutons that qualified as transient on the first
(P 4 0.5, w2 test). This suggests that the formation of new GABAergic day, seven were present the next day at the location where the bouton
synapses occurs through the appearance of a new bouton at pre-existing had first occurred. In the other eight cases, the axon-dendrite crossing
axon-dendrite crossings, irrespective of whether the new bouton is was still present, but a bouton could not be discerned. This suggests that
made on a spine or on the dendritic shaft of the postsynaptic neuron. at least a subset of transient boutons is transformed over time into stable
boutons, possibly forming synapses. Of the transient contacts made by
Lifetime of transient contacts and new boutons 11 axonal protrusions and 3 dendritic protrusions that were observed on
As described above, we observed three types of transient events. the first day, none were present the next day and the axons and dendrites
Transient contacts were initiated by the dendrite through the out- appeared to be unchanged (see Table 2). Although it is possible that
growth of a dendritic protrusion that touched a GABAergic bouton but small dendritic protrusions were missed as a result of the weak dendrite
could also be initiated by the outgrowth of an axonal protrusion labeling on the second day, these observations are consistent with the
contacting the dendrite. Furthermore, boutons transiently appeared idea that transient contacts formed by axonal or dendritic protrusions
at an existing axon-dendrite crossing. For each of these events, we are generally not transformed into GABAergic synapses.
Figure 4 Lifetime of transient contacts and boutons. (a,b) Time course of new
a Stable boutons b Transient boutons stable (a, n ¼ 12) and transient boutons (b, n ¼ 30). Individual boutons are
1.0 1.0
represented in different colors, and the average time course is given by the
Normalized overlap
Normalized overlap
0.8 0.8 thick black curve. The number of overlapping pixels between bouton and
0.6 0.6 shaft (normalized to maximum overlap) is plotted for all time points, aligned
0.4 0.4 to the time when the bouton (first) appeared. New stable boutons always
0.2
stayed in contact with the shaft, whereas transient boutons disappeared and
0.2
sometimes reappeared at later time points. In some experiments, we
0.0 0.0
–3 –2 –1 0 1 2 3 4 5 h 1d –3 –2 –1 0 1 2 3 4 5 h 1d examined the boutons on the day following the imaging period (1 d, see also
Time Time Table 2). (c) Average duration of single episodes of contact by dendritic and
axonal protrusions and transient and stable bouton occurrences. (d) Number
© 2008 Nature Publishing Group http://www.nature.com/natureneuroscience
Repeated contacts
c Episode duration d or appearances e Total contact time of repeated contacts or bouton appearances. (e) Percentage of the imaging
2.5
40% after contacting glutamatergic boutons also occurred, similar to pro-
2.0
30% trusions contacting GABAergic boutons. Taken together, these data
1.5
20%
1.0 suggest that some, but not all, of the contacts with glutamatergic
0.5 10%
19 25 30 12 19 25 30 12 19 25 30 12
boutons were transformed into stable glutamatergic spine contacts,
0.0 1 0%
DP AP TB SB DP AP TB SB DP AP TB SB consistent with the proposed role of dendritic protrusions in the
formation of glutamatergic spine synapses4–6,9. Our finding that
dendritic protrusions distinguish between GABAergic and glutamater-
Lifetime of protrusions gic boutons is further supported by the individual time courses of
We noticed that dendritic protrusions often retracted soon after contact formation by dendritic protrusions (Fig. 5d,e). These data
contacting a GABAergic bouton, whereas axonal protrusions appeared strongly suggest that, although dendritic protrusions are important in
to live longer. We examined whether this was the result of a general the formation of glutamatergic spine contacts, contacts between
difference in lifetime between dendritic and axonal protrusions or dendritic protrusions and GABAergic boutons are short lived and do
whether the transient contact with the GABAergic bouton or dendritic not normally result in new GABAergic synapses.
shaft, respectively, affected the lifetimes of the protrusions. We there-
fore measured the lifetime of an arbitrarily chosen population of newly New boutons can form synapses in several hours
emerging (that is, not present at the first time point) axonal and The results described above suggest that new GABAergic boutons
dendritic protrusions that were not contacting any labeled structure. appearing at pre-existing axon-dendrite crossings may be important
Axonal protrusions that had contacted a labeled dendrite had a range for establishing new GABAergic synapses. However, our two-photon
of lifetimes that was indistinguishable from the range of lifetimes of the data show anatomical apposition as well as a morphological change
population of arbitrarily chosen GABAergic axonal protrusions (Fig. 5a). into a bouton, but they do not conclusively demonstrate that these new
For dendritic protrusions, the picture was very different. Although the boutons actually form functional synapses, nor do they indicate at what
arbitrarily chosen dendritic protrusions included both short-lived and time scale these new synapses form. For glutamatergic synapses, it has
long-lived protrusions, all dendritic protrusions that contacted a been shown that the presynaptic active zone can be functional in
GABAergic bouton had short lifetimes (Fig. 5b). This suggests that 30–60 min after the initial contact between axon and dendrite and that
only short-lived dendritic protrusions contact GABAergic boutons or, postsynaptic scaffold proteins and receptors are recruited soon there-
somewhat more likely, that contacting a GABAergic bouton shortens the after23,25,29,30 (but also see refs. 7,8). At present, detailed information
lifetime of a dendritic protrusion. Alternatively, some of the arbitrarily on the time course of the recruitment of synaptic molecules to new
chosen protrusions contacted something that prolonged their lifetimes. GABAergic synapses is almost completely lacking31–33.
The arbitrarily chosen population of dendritic protrusions probably To start addressing this issue, we carried out time-lapse imaging of
contacts a rather inhomogeneous selection of structures, including GFP-labeled GABAergic axons, followed by post hoc immunostaining for
GABAergic and glutamatergic axons and boutons, glial processes, and GABAergic pre- and postsynaptic markers, vesicular GABA transporter
other dendrites28. We therefore tested more specifically whether the (VGAT) and gephyrin (Fig. 6). For comparison, we immunostained slice
lifetime of dendritic protrusions depends on whether they contact a cultures without previous time-lapse imaging and found that the vast
glutamatergic or GABAergic bouton. To this end, we labeled glutama- majority of GABAergic boutons contained VGAT and were associated
tergic axons from CA3 neurons with a bolus-loading technique (N.B., with gephyrin (Fig. 6c,d). In fact, only 2.4% of GFP-positive boutons
C.J.W., Fonseca, R., T.B. and Nägerl, U.V., unpublished data). In these
experiments, we observed 20 dendritic protrusions growing from Table 2 Contacts that were present the following day
labeled CA1 pyramidal neurons that contacted labeled glutamatergic
Pre-existing stable boutons 81 of 86 (94%)
boutons. In contrast with the protrusions contacting GABAergic
Transient contacts
boutons, a substantial fraction of these protrusions had lifetimes that
Dendritic protrusions 0 of 3* (0%)*
were greater than 2 h (Fig. 5b). In fact, in 5 of the 20 cases, the Axonal protrusions 0 of 11 (0%)
protrusion was still present and contacting the glutamatergic bouton at New boutons
the last imaging time point (Fig. 5c). In many cases, the dendritic Transient boutons 7 of 15 (47%)
protrusions stayed in contact for much longer than was observed for Stable boutons 2 of 2 (100%)
dendritic protrusions contacting a GABAergic bouton. Nevertheless,
Data from 5 experiments. *It is unlikely but cannot be completely excluded, that small
not all contacts between dendritic protrusions and glutamatergic dendritic protrusions might have been missed as a result of the weak dendrite labeling on
boutons were long lasting. Retraction of dendritic protrusions shortly the second day.
a Axonal protrusions b Dendritic protrusions c Glutamatergic bouton Figure 5 Lifetime of dendritic and axonal
protrusions. (a) The mean (upper) and cumulative
* 0 hr 0 hr
1.6 1.6 distributions (lower) of the lifetimes of axonal
1.4 1.4 protrusions that contacted a labeled dendrite were
1.2 1.2 not different from those of arbitrarily selected
Lifetime (h)
Lifetime (h)
1.0 1.0
0.8 0.8 axonal protrusions. (b) The mean lifetime (upper)
0.6 0.6 1.5 hr 1.5 hr of dendritic protrusions that contacted a
0.4 0.4 DP GABAergic bouton was significantly shorter than
0.2 25 85 0.2 19 110
0.0 0.0 that of the arbitrarily chosen dendritic protrusions
Contacting Arbitrarily Contacting Arbitrarily (P ¼ 0.03, Mann-Whitney U test). The cumulative
labeled dendrite chosen GABAergic bouton chosen
distributions also clearly show the shorter
© 2008 Nature Publishing Group http://www.nature.com/natureneuroscience
2 hr 2 hr
DP lifetimes of GABA-contacting protrusions (lower,
1.0 1.0 gray solid lines; P o 0.01, w2 test). Dendritic
Cumulative probability
Cumulative probability
Normalized overlap
(total 1,317 boutons, 12 slices) lacked a synaptic marker. This indicates Axon-dendrite crossings
that, in general, GABAergic boutons reliably reflect GABAergic synapses. Our data show that new GABAergic synapses are formed at pre-existing
During 3 h of time-lapse imaging, most GABAergic boutons were axon-dendrite crossings. Taking this result into consideration, a flexible,
present for the entire imaging period and only 5–10% of boutons were modifiable GABAergic system would require a considerable fraction of
plastic, that is, appeared or disappeared. Post hoc immunostaining a axon-dendrite crossings that do not (yet) have synaptic contacts so that
bouton that appeared at t ¼ 1.5 h during the imaging period (Fig. 6a,b) new synapses can still be formed when needed. We therefore estimated
showed that, at the time of fixation (2 h after first appearance), the new the percentage of GABAergic axon-dendrite crossings with and without
bouton (yellow circle) had accumulated VGAT, while the postsynaptic boutons. We found that only 42 ± 8% (mean ± s.d.; 21 slice cultures) of
scaffolding protein gephyrin was not (yet) present (Fig. 6b). Stable axon-dendrite crossings contained one or more boutons. This indicates
boutons on the same and nearby axons (blue circles) were immuno- that there are still a substantial number of available axon-dendrite
positive for VGAT and gephyrin (Fig. 6b), presumably reflecting stable crossings where new GABAergic contacts can be formed.
GABAergic synapses. Notably, the percentage of axon-dendrite crossings with boutons was
When we examined multiple new boutons that appeared at various similar in all slices (range of 30–56%, with one exception of 21%; 21
intervals before fixation, we found that the majority of new boutons slices) and did not depend on the total number of crossings. This
acquired VGAT in the first hour after appearance (all time points are suggests that the fraction of axon-dendrite crossings that have synapses
different from background, P o 0.01, w2 test), whereas gephyrin may be tightly controlled by the GABAergic system so that the
accumulated at a slower rate (Fig. 6c). We found that B70% of new generation of new synaptic contacts is always permitted.
boutons were immunopositive for both synaptic markers 3 h after their
first appearance, presumably reflecting new GABAergic synapses DISCUSSION
(Fig. 6d). At locations where boutons had disappeared during the The overwhelming majority of studies on synapse formation in the
two-photon imaging period (at various intervals before fixation), the CNS have been carried out on glutamatergic synapses. However,
presynaptic protein VGAT was not present above background levels, besides the greater part of synapses, which are glutamatergic and
whereas postsynaptic gephyrin could occasionally be found up to 1 h often located on spines, a substantial fraction of synapses in the
after the bouton disappeared (data not shown). This might indicate that brain are GABAergic. These synapses are located mostly (although
presynaptic changes precede postsynaptic alterations during GABAergic not exclusively) on dendritic shafts. Our experiments were conducted
synapse formation and disassembly, but more detailed studies will be in vitro on a specific subset of GABAergic neurons. Therefore, care needs
needed to fully resolve these processes. Notably, our findings indicate to be taken before generalizing these results to all GABAergic axons and/
that a large fraction of newly appearing GABAergic boutons forms or the in vivo situation. Nevertheless, we demonstrate that, at least in the
new GABAergic synapses with a time constant on the order of CA1 region of the hippocampus and under our experimental circum-
a few hours. stances, GABAergic synapses are formed via a fundamentally different
A recent study showed that axons appear to have preferred locations for 1 mM pyruvate and 1 mM Trolox. The temperature was maintained at 35 1C.
forming new boutons, even in the absence of postsynaptic structure40. CA1 pyramidal neurons were filled through a patch pipette and 250 mM Alexa
At present, it is not clear how the locations for new boutons are deter- Fluor 594 was added to the pipette solution.
mined. One possibility is that these locations are determined by the For experiments with labeled glutamatergic axons, slice cultures of wild-type
C57 BL/6 mice were used. Glutamatergic axons were labeled via extracellular
presence of cell adhesion or other signaling molecules. Indeed, recent
bolus loading from a pipette in the CA3 pyramidal layer, as will be described
studies have shown that the formation of GABAergic and glutamatergic elsewhere (N.B., C.J.W., Fonseca, R., T.B. and Nägerl, U.V., unpublished data)29.
synapses is regulated by different synaptic adhesion molecules41–43.
Differential expression of such molecules on dendritic shafts and Imaging. Time-lapse images were acquired using a custom-made two-photon
protrusions could provide an explanation for the different mechanisms laser-scanning microscope based on an Olympus IX70 microscope with a 40,
1.2-NA water-immersion objective (Olympus). GFP and Alexa Fluor 594 were
© 2008 Nature Publishing Group http://www.nature.com/natureneuroscience
visualized by fluorescent labeling of VGAT (rabbit antibody to VGAT, 1:200, 14. Saito, Y., Song, W.J. & Murakami, F. Preferential termination of corticorubral axons on
Synaptic Systems) and the postsynaptic scaffold protein gephyrin (mouse spine-like dendritic protrusions in developing cat. J. Neurosci. 17, 8792–8803 (1997).
15. Yuste, R. & Bonhoeffer, T. Genesis of dendritic spines: insights from ultrastructural and
antibody to gephyrin, 1:400, Synaptic Systems). Slice cultures were fixed in imaging studies. Nat. Rev. Neurosci. 5, 24–34 (2004).
4% paraformaldehyde (wt/vol, pre-warmed to 35 1C) for 4 h at 4 1C, washed 16. Somogyi, P., Tamás, G., Lujan, R. & Buhl, E.H. Salient features of synaptic organization
extensively in 0.1 M phosphate buffer and removed from their coverslips to be in the cerebral cortex. Brain Res. Brain Res. Rev. 26, 113–135 (1998).
processed as free-floating slices. Permeabilization and blocking was achieved by 17. López-Bendito, G. et al. Preferential origin and layer destination of GAD65-GFP cortical
interneurons. Cereb. Cortex 14, 1122–1133 (2004).
incubation of the sections for 24 h at 4 1C in 0.1 M phosphate buffer, 18. Kalisman, N., Silberberg, G. & Markram, H. The neocortical microcircuit as a tabula
0.4% Triton X-100 (vol/vol) and 10% horse serum (vol/vol). Primary anti- rasa. Proc. Natl. Acad. Sci. USA 102, 880–885 (2005).
bodies were applied overnight at 4 1C in 0.1 M phosphate buffer with 0.4% 19. Shepherd, G.M. & Harris, K.M. Three-dimensional structure and composition of CA3-
Triton and 5% horse serum. Following extensive washing, appropriate second- CA1 axons in rat hippocampal slices: implications for presynaptic connectivity and
© 2008 Nature Publishing Group http://www.nature.com/natureneuroscience